Publications
2017 |
Chen, Gang; He, Yinan; Santis, Angela De; Li, Guosheng; Cobb, Richard; Meentemeyer, Ross K Assessing the impact of emerging forest disease on wildfire using Landsat and KOMPSAT-2 data Journal Article Remote Sensing of Environment, 195 , pp. 218-229, 2017. Abstract | Links | BibTeX | Tags: burn severity, forest disease, interacting disturbances, Landsat, object-based @article{Chen2017, title = {Assessing the impact of emerging forest disease on wildfire using Landsat and KOMPSAT-2 data}, author = {Gang Chen and Yinan He and Angela De Santis and Guosheng Li and Richard Cobb and Ross K. Meentemeyer}, url = {https://doi.org/10.1016/j.rse.2017.04.005}, doi = {10.1016/j.rse.2017.04.005}, year = {2017}, date = {2017-06-15}, journal = {Remote Sensing of Environment}, volume = {195}, pages = {218-229}, abstract = {Environmental disturbance regimes are more frequently being altered by historically novel events and disturbance interactions, which may trigger reorganizations of new ecosystem states and processes. Here we examine synergies between emerging forest disease and wildfire to determine whether disease outbreak changes environmental drivers of burn severity using sudden oak death and the basin complex fire in California as a case study of novel disturbance interaction. We mapped the spatial distribution of sudden oak death tree mortality using a new object-based filter with 1.0 m resolution KOMPSAT-2 images. We integrated these data with a physical simulation model of burn severity informed by post-fire Landsat data. Model performance varied across stages of disease establishment (early, middle and late) with stronger relationships occurring during later stages of disease progression. Multiscale statistical analysis of environmental drivers of burn severity in diseased compared to healthy forests showed that sudden oak death tree mortality altered relationships between burn severity and the biophysical environment. Specifically, compared to the healthy forests, those affected by disease exhibited higher landscape heterogeneity at smaller spatial scales (e.g., 25 and 50 m), which has been associated with decreased burn severity in the literature. Our results showed the opposite pattern. That is, a disease-affected landscape comprising less connected patches and higher patch shape complexity was more likely to experience greater burn severity. This suggests that disease-caused increases in surface fuels may have reduced the landscape's resistance to fire and in turn increased burn severity in forest patches neighboring disease-impacted forests.}, keywords = {burn severity, forest disease, interacting disturbances, Landsat, object-based}, pubstate = {published}, tppubtype = {article} } Environmental disturbance regimes are more frequently being altered by historically novel events and disturbance interactions, which may trigger reorganizations of new ecosystem states and processes. Here we examine synergies between emerging forest disease and wildfire to determine whether disease outbreak changes environmental drivers of burn severity using sudden oak death and the basin complex fire in California as a case study of novel disturbance interaction. We mapped the spatial distribution of sudden oak death tree mortality using a new object-based filter with 1.0 m resolution KOMPSAT-2 images. We integrated these data with a physical simulation model of burn severity informed by post-fire Landsat data. Model performance varied across stages of disease establishment (early, middle and late) with stronger relationships occurring during later stages of disease progression. Multiscale statistical analysis of environmental drivers of burn severity in diseased compared to healthy forests showed that sudden oak death tree mortality altered relationships between burn severity and the biophysical environment. Specifically, compared to the healthy forests, those affected by disease exhibited higher landscape heterogeneity at smaller spatial scales (e.g., 25 and 50 m), which has been associated with decreased burn severity in the literature. Our results showed the opposite pattern. That is, a disease-affected landscape comprising less connected patches and higher patch shape complexity was more likely to experience greater burn severity. This suggests that disease-caused increases in surface fuels may have reduced the landscape's resistance to fire and in turn increased burn severity in forest patches neighboring disease-impacted forests. |
2015 |
Chen, Gang; Metz, Margaret R; Rizzo, David M; Meentemeyer, Ross K Mapping burn severity in a disease-impacted forest landscape using Landsat and MASTER imagery Journal Article International Journal of Applied Earth Observation and Geoinformation, 40 , pp. 91-99, 2015. Abstract | Links | BibTeX | Tags: burn severity, forest fire, interacting disturbances, invasion, Landsat, MASTER, sudden oak death @article{Chen2015, title = {Mapping burn severity in a disease-impacted forest landscape using Landsat and MASTER imagery}, author = {Gang Chen and Margaret R. Metz and David M. Rizzo and Ross K. Meentemeyer}, url = {http://www.sciencedirect.com/science/article/pii/S0303243415000847}, doi = {dx.doi.org/10.1016/j.jag.2015.04.005}, year = {2015}, date = {2015-04-22}, journal = {International Journal of Applied Earth Observation and Geoinformation}, volume = {40}, pages = {91-99}, abstract = {Global environmental change has increased forest vulnerability to the occurrence of interacting disturbances, including wildfires and invasive diseases. Mapping post-fire burn severity in a disease-affected forest often faces challenges because burned and infested trees may exhibit a high similarity in spectral reflectance. In this study, we combined (pre- and post-fire) Landsat imagery and (post-fire) high-spectral resolution airborne MASTER data [MODIS (moderate resolution imaging spectroradiometer)/ASTER (advanced spaceborne thermal emission and reflection radiometer)] to map burn severity in a California coastal forest environment, where a non-native forest disease sudden oak death (SOD) was causing substantial tree mortality. Results showed that the use of Landsat plus MASTER bundle performed better than using the individual sensors in most of the evaluated forest strata from ground to canopy layers (i.e., substrate, shrubs, intermediate-sized trees, dominant trees and average), with the best model performance achieved at the dominant tree layer. The mid to thermal infrared spectral bands (3.0–12.5 μm) from MASTER were found to augment Landsat’s visible to shortwave infrared bands in burn severity assessment. We also found that infested and uninfested forests similarly experienced moderate to high degrees of burns where CBI (composite burn index) values were higher than 1. However, differences occurred in the regions with low burn severity (CBI values lower than 1), where uninfested stands revealed a much lower burn effect than that in infested stands, possibly due to their higher resilience to small fire disturbances as a result of higher leaf water content.}, keywords = {burn severity, forest fire, interacting disturbances, invasion, Landsat, MASTER, sudden oak death}, pubstate = {published}, tppubtype = {article} } Global environmental change has increased forest vulnerability to the occurrence of interacting disturbances, including wildfires and invasive diseases. Mapping post-fire burn severity in a disease-affected forest often faces challenges because burned and infested trees may exhibit a high similarity in spectral reflectance. In this study, we combined (pre- and post-fire) Landsat imagery and (post-fire) high-spectral resolution airborne MASTER data [MODIS (moderate resolution imaging spectroradiometer)/ASTER (advanced spaceborne thermal emission and reflection radiometer)] to map burn severity in a California coastal forest environment, where a non-native forest disease sudden oak death (SOD) was causing substantial tree mortality. Results showed that the use of Landsat plus MASTER bundle performed better than using the individual sensors in most of the evaluated forest strata from ground to canopy layers (i.e., substrate, shrubs, intermediate-sized trees, dominant trees and average), with the best model performance achieved at the dominant tree layer. The mid to thermal infrared spectral bands (3.0–12.5 μm) from MASTER were found to augment Landsat’s visible to shortwave infrared bands in burn severity assessment. We also found that infested and uninfested forests similarly experienced moderate to high degrees of burns where CBI (composite burn index) values were higher than 1. However, differences occurred in the regions with low burn severity (CBI values lower than 1), where uninfested stands revealed a much lower burn effect than that in infested stands, possibly due to their higher resilience to small fire disturbances as a result of higher leaf water content. |
Chen, Gang; Metz, Margaret R; Rizzo, David M; Dillon, Whalen W; Meentemeyer, Ross K Object-based assessment of burn severity in diseased forests using high-spatial and high-spectral resolution MASTER airborne imagery Journal Article ISPRS Journal of Photogrammetry and Remote Sensing, 102 , pp. 38-47, 2015. Abstract | Links | BibTeX | Tags: band reduction, burn severity, forest disease, GEOBIA, interacting disturbances, MNF, PCA @article{Chen2015b, title = {Object-based assessment of burn severity in diseased forests using high-spatial and high-spectral resolution MASTER airborne imagery}, author = {Gang Chen and Margaret R. Metz and David M. Rizzo and Whalen W. Dillon and Ross K. Meentemeyer}, url = {http://www.sciencedirect.com/science/article/pii/S0924271615000210}, doi = {doi:10.1016/j.isprsjprs.2015.01.004}, year = {2015}, date = {2015-02-06}, journal = {ISPRS Journal of Photogrammetry and Remote Sensing}, volume = {102}, pages = {38-47}, abstract = {Forest ecosystems are subject to a variety of disturbances with increasing intensities and frequencies, which may permanently change the trajectories of forest recovery and disrupt the ecosystem services provided by trees. Fire and invasive species, especially exotic disease-causing pathogens and insects, are examples of disturbances that together could pose major threats to forest health. This study examines the impacts of fire and exotic disease (sudden oak death) on forests, with an emphasis on the assessment of post-fire burn severity in a forest where trees have experienced three stages of disease progression pre-fire: early-stage (trees retaining dried foliage and fine twigs), middle-stage (trees losing fine crown fuels), and late-stage (trees falling down). The research was conducted by applying Geographic Object-Based Image Analysis (GEOBIA) to MASTER airborne images that were acquired immediately following the fire for rapid assessment and contained both high-spatial (4 m) and high-spectral (50 bands) resolutions. Although GEOBIA has gradually become a standard tool for analyzing high-spatial resolution imagery, high-spectral resolution data (dozens to hundreds of bands) can dramatically reduce computation efficiency in the process of segmentation and object-based variable extraction, leading to complicated variable selection for succeeding modeling. Hence, we also assessed two widely used band reduction algorithms, PCA (principal component analysis) and MNF (minimum noise fraction), for the delineation of image objects and the subsequent performance of burn severity models using either PCA or MNF derived variables. To increase computation efficiency, only the top 5 PCA and MNF and top 10 PCA and MNF components were evaluated, which accounted for 10% and 20% of the total number of the original 50 spectral bands, respectively. Results show that if no band reduction was applied the models developed for the three stages of disease progression had relatively similar performance, where both spectral responses and texture contributed to burn assessments. However, the application of PCA and MNF introduced much greater variation among models across the three stages. For the early-stage disease progression, neither band reduction algorithms improved or retained the accuracy of burn severity modeling (except for the use of 10 MNF components). Compared to the no-band-reduction scenario, band reduction led to a greater level of overestimation of low-degree burns and underestimation of medium-degree burns, suggesting that the spectral variation removed by PCA and MNF was vital for distinguishing between the spectral reflectance from disease-induced dried crowns (still retaining high structural complexity) and fire ash. For the middle-stage, both algorithms improved the model R2 values by 2–37%, while the late-stage models had comparable or better performance to those using the original 50 spectral bands. This could be explained by the loss of tree crowns enabling better signal penetration, thus leading to reduced spectral variation from canopies. Hence, spectral bands containing a high degree of random noise were correctly removed by the band reduction algorithms. Compared to the middle-stage, the late-stage forest stands were covered by large piles of fallen trees and branches, resulting in higher variability of MASTER imagery. The ability of band reduction to improve the model performance for these late-stage forest stands was reduced, because the valuable spectral variation representing the actual late-stage forest status was partially removed by both algorithms as noise. Our results indicate that PCA and MNF are promising for balancing computation efficiency and the performance of burn severity models in forest stands subject to the middle and late stages of sudden oak death disease progression. Compared to PCA, MNF dramatically reduced image spectral variation, generating larger image objects with less complexity of object shapes. Whereas, PCA-based models delivered superior performance in most evaluated cases suggesting that some key spectral variability contributing to the accuracy of burn severity models in diseased forests may have been removed together with true spectral noise through MNF transformations.}, keywords = {band reduction, burn severity, forest disease, GEOBIA, interacting disturbances, MNF, PCA}, pubstate = {published}, tppubtype = {article} } Forest ecosystems are subject to a variety of disturbances with increasing intensities and frequencies, which may permanently change the trajectories of forest recovery and disrupt the ecosystem services provided by trees. Fire and invasive species, especially exotic disease-causing pathogens and insects, are examples of disturbances that together could pose major threats to forest health. This study examines the impacts of fire and exotic disease (sudden oak death) on forests, with an emphasis on the assessment of post-fire burn severity in a forest where trees have experienced three stages of disease progression pre-fire: early-stage (trees retaining dried foliage and fine twigs), middle-stage (trees losing fine crown fuels), and late-stage (trees falling down). The research was conducted by applying Geographic Object-Based Image Analysis (GEOBIA) to MASTER airborne images that were acquired immediately following the fire for rapid assessment and contained both high-spatial (4 m) and high-spectral (50 bands) resolutions. Although GEOBIA has gradually become a standard tool for analyzing high-spatial resolution imagery, high-spectral resolution data (dozens to hundreds of bands) can dramatically reduce computation efficiency in the process of segmentation and object-based variable extraction, leading to complicated variable selection for succeeding modeling. Hence, we also assessed two widely used band reduction algorithms, PCA (principal component analysis) and MNF (minimum noise fraction), for the delineation of image objects and the subsequent performance of burn severity models using either PCA or MNF derived variables. To increase computation efficiency, only the top 5 PCA and MNF and top 10 PCA and MNF components were evaluated, which accounted for 10% and 20% of the total number of the original 50 spectral bands, respectively. Results show that if no band reduction was applied the models developed for the three stages of disease progression had relatively similar performance, where both spectral responses and texture contributed to burn assessments. However, the application of PCA and MNF introduced much greater variation among models across the three stages. For the early-stage disease progression, neither band reduction algorithms improved or retained the accuracy of burn severity modeling (except for the use of 10 MNF components). Compared to the no-band-reduction scenario, band reduction led to a greater level of overestimation of low-degree burns and underestimation of medium-degree burns, suggesting that the spectral variation removed by PCA and MNF was vital for distinguishing between the spectral reflectance from disease-induced dried crowns (still retaining high structural complexity) and fire ash. For the middle-stage, both algorithms improved the model R2 values by 2–37%, while the late-stage models had comparable or better performance to those using the original 50 spectral bands. This could be explained by the loss of tree crowns enabling better signal penetration, thus leading to reduced spectral variation from canopies. Hence, spectral bands containing a high degree of random noise were correctly removed by the band reduction algorithms. Compared to the middle-stage, the late-stage forest stands were covered by large piles of fallen trees and branches, resulting in higher variability of MASTER imagery. The ability of band reduction to improve the model performance for these late-stage forest stands was reduced, because the valuable spectral variation representing the actual late-stage forest status was partially removed by both algorithms as noise. Our results indicate that PCA and MNF are promising for balancing computation efficiency and the performance of burn severity models in forest stands subject to the middle and late stages of sudden oak death disease progression. Compared to PCA, MNF dramatically reduced image spectral variation, generating larger image objects with less complexity of object shapes. Whereas, PCA-based models delivered superior performance in most evaluated cases suggesting that some key spectral variability contributing to the accuracy of burn severity models in diseased forests may have been removed together with true spectral noise through MNF transformations. |
2013 |
Metz, Margaret R; Varner, Morgan J; Frangioso, Kerri M; Meentemeyer, Ross K; Rizzo, David M Unexpected redwood mortality from synergies between wildfire and an emerging infectious disease Journal Article Ecology, 94 (10), pp. 2152-2159, 2013. Abstract | Links | BibTeX | Tags: biological invasions, global change, interacting disturbances, Phytophthora ramorum, Sequoia sempervirens, sudden oak death, synergy @article{Metz2013, title = {Unexpected redwood mortality from synergies between wildfire and an emerging infectious disease }, author = {Margaret R. Metz and J. Morgan Varner and Kerri M. Frangioso and Ross K. Meentemeyer and David M. Rizzo}, url = {http://dx.doi.org/10.1890/13-0915.1}, doi = {10.1890/13-0915.1}, year = {2013}, date = {2013-10-01}, journal = {Ecology}, volume = {94}, number = {10}, pages = {2152-2159}, abstract = {An under-examined component of global change is the alteration of disturbance regimes due to warming climates, continued species invasions, and accelerated land-use change. These drivers of global change are themselves novel ecosystem disturbances that may interact with historically occurring disturbances in complex ways. Here we use the natural experiment presented by wildfires in redwood forests impacted by an emerging infectious disease to demonstrate unexpected synergies of novel disturbance interactions. The dominant tree, coast redwood (fire resistant without negative disease impacts), experienced unexpected synergistic increases in mortality when fire and disease co-occurred. The increased mortality risk, more than fourfold at the peak of the effect, was not predictable from impacts of either disturbance alone. Changes in fire behavior associated with changes to forest fuels that occurred through disease progression overwhelmed redwood's usual resilience to wildfire. Our results demonstrate the potential for interacting disturbances to initiate novel successional trajectories and compromise ecosystem resilience.}, keywords = {biological invasions, global change, interacting disturbances, Phytophthora ramorum, Sequoia sempervirens, sudden oak death, synergy}, pubstate = {published}, tppubtype = {article} } An under-examined component of global change is the alteration of disturbance regimes due to warming climates, continued species invasions, and accelerated land-use change. These drivers of global change are themselves novel ecosystem disturbances that may interact with historically occurring disturbances in complex ways. Here we use the natural experiment presented by wildfires in redwood forests impacted by an emerging infectious disease to demonstrate unexpected synergies of novel disturbance interactions. The dominant tree, coast redwood (fire resistant without negative disease impacts), experienced unexpected synergistic increases in mortality when fire and disease co-occurred. The increased mortality risk, more than fourfold at the peak of the effect, was not predictable from impacts of either disturbance alone. Changes in fire behavior associated with changes to forest fuels that occurred through disease progression overwhelmed redwood's usual resilience to wildfire. Our results demonstrate the potential for interacting disturbances to initiate novel successional trajectories and compromise ecosystem resilience. |
| 1. | Chen, Gang; He, Yinan; Santis, Angela De; Li, Guosheng; Cobb, Richard; Meentemeyer, Ross K: Assessing the impact of emerging forest disease on wildfire using Landsat and KOMPSAT-2 data. In: Remote Sensing of Environment, 195 , pp. 218-229, 2017. (Type: Journal Article | Abstract | Links | BibTeX) @article{Chen2017, title = {Assessing the impact of emerging forest disease on wildfire using Landsat and KOMPSAT-2 data}, author = {Gang Chen and Yinan He and Angela De Santis and Guosheng Li and Richard Cobb and Ross K. Meentemeyer}, url = {https://doi.org/10.1016/j.rse.2017.04.005}, doi = {10.1016/j.rse.2017.04.005}, year = {2017}, date = {2017-06-15}, journal = {Remote Sensing of Environment}, volume = {195}, pages = {218-229}, abstract = {Environmental disturbance regimes are more frequently being altered by historically novel events and disturbance interactions, which may trigger reorganizations of new ecosystem states and processes. Here we examine synergies between emerging forest disease and wildfire to determine whether disease outbreak changes environmental drivers of burn severity using sudden oak death and the basin complex fire in California as a case study of novel disturbance interaction. We mapped the spatial distribution of sudden oak death tree mortality using a new object-based filter with 1.0 m resolution KOMPSAT-2 images. We integrated these data with a physical simulation model of burn severity informed by post-fire Landsat data. Model performance varied across stages of disease establishment (early, middle and late) with stronger relationships occurring during later stages of disease progression. Multiscale statistical analysis of environmental drivers of burn severity in diseased compared to healthy forests showed that sudden oak death tree mortality altered relationships between burn severity and the biophysical environment. Specifically, compared to the healthy forests, those affected by disease exhibited higher landscape heterogeneity at smaller spatial scales (e.g., 25 and 50 m), which has been associated with decreased burn severity in the literature. Our results showed the opposite pattern. That is, a disease-affected landscape comprising less connected patches and higher patch shape complexity was more likely to experience greater burn severity. This suggests that disease-caused increases in surface fuels may have reduced the landscape's resistance to fire and in turn increased burn severity in forest patches neighboring disease-impacted forests.}, keywords = {}, pubstate = {published}, tppubtype = {article} } Environmental disturbance regimes are more frequently being altered by historically novel events and disturbance interactions, which may trigger reorganizations of new ecosystem states and processes. Here we examine synergies between emerging forest disease and wildfire to determine whether disease outbreak changes environmental drivers of burn severity using sudden oak death and the basin complex fire in California as a case study of novel disturbance interaction. We mapped the spatial distribution of sudden oak death tree mortality using a new object-based filter with 1.0 m resolution KOMPSAT-2 images. We integrated these data with a physical simulation model of burn severity informed by post-fire Landsat data. Model performance varied across stages of disease establishment (early, middle and late) with stronger relationships occurring during later stages of disease progression. Multiscale statistical analysis of environmental drivers of burn severity in diseased compared to healthy forests showed that sudden oak death tree mortality altered relationships between burn severity and the biophysical environment. Specifically, compared to the healthy forests, those affected by disease exhibited higher landscape heterogeneity at smaller spatial scales (e.g., 25 and 50 m), which has been associated with decreased burn severity in the literature. Our results showed the opposite pattern. That is, a disease-affected landscape comprising less connected patches and higher patch shape complexity was more likely to experience greater burn severity. This suggests that disease-caused increases in surface fuels may have reduced the landscape's resistance to fire and in turn increased burn severity in forest patches neighboring disease-impacted forests. |
| 2. | Chen, Gang; Metz, Margaret R; Rizzo, David M; Meentemeyer, Ross K: Mapping burn severity in a disease-impacted forest landscape using Landsat and MASTER imagery. In: International Journal of Applied Earth Observation and Geoinformation, 40 , pp. 91-99, 2015. (Type: Journal Article | Abstract | Links | BibTeX) @article{Chen2015, title = {Mapping burn severity in a disease-impacted forest landscape using Landsat and MASTER imagery}, author = {Gang Chen and Margaret R. Metz and David M. Rizzo and Ross K. Meentemeyer}, url = {http://www.sciencedirect.com/science/article/pii/S0303243415000847}, doi = {dx.doi.org/10.1016/j.jag.2015.04.005}, year = {2015}, date = {2015-04-22}, journal = {International Journal of Applied Earth Observation and Geoinformation}, volume = {40}, pages = {91-99}, abstract = {Global environmental change has increased forest vulnerability to the occurrence of interacting disturbances, including wildfires and invasive diseases. Mapping post-fire burn severity in a disease-affected forest often faces challenges because burned and infested trees may exhibit a high similarity in spectral reflectance. In this study, we combined (pre- and post-fire) Landsat imagery and (post-fire) high-spectral resolution airborne MASTER data [MODIS (moderate resolution imaging spectroradiometer)/ASTER (advanced spaceborne thermal emission and reflection radiometer)] to map burn severity in a California coastal forest environment, where a non-native forest disease sudden oak death (SOD) was causing substantial tree mortality. Results showed that the use of Landsat plus MASTER bundle performed better than using the individual sensors in most of the evaluated forest strata from ground to canopy layers (i.e., substrate, shrubs, intermediate-sized trees, dominant trees and average), with the best model performance achieved at the dominant tree layer. The mid to thermal infrared spectral bands (3.0–12.5 μm) from MASTER were found to augment Landsat’s visible to shortwave infrared bands in burn severity assessment. We also found that infested and uninfested forests similarly experienced moderate to high degrees of burns where CBI (composite burn index) values were higher than 1. However, differences occurred in the regions with low burn severity (CBI values lower than 1), where uninfested stands revealed a much lower burn effect than that in infested stands, possibly due to their higher resilience to small fire disturbances as a result of higher leaf water content.}, keywords = {}, pubstate = {published}, tppubtype = {article} } Global environmental change has increased forest vulnerability to the occurrence of interacting disturbances, including wildfires and invasive diseases. Mapping post-fire burn severity in a disease-affected forest often faces challenges because burned and infested trees may exhibit a high similarity in spectral reflectance. In this study, we combined (pre- and post-fire) Landsat imagery and (post-fire) high-spectral resolution airborne MASTER data [MODIS (moderate resolution imaging spectroradiometer)/ASTER (advanced spaceborne thermal emission and reflection radiometer)] to map burn severity in a California coastal forest environment, where a non-native forest disease sudden oak death (SOD) was causing substantial tree mortality. Results showed that the use of Landsat plus MASTER bundle performed better than using the individual sensors in most of the evaluated forest strata from ground to canopy layers (i.e., substrate, shrubs, intermediate-sized trees, dominant trees and average), with the best model performance achieved at the dominant tree layer. The mid to thermal infrared spectral bands (3.0–12.5 μm) from MASTER were found to augment Landsat’s visible to shortwave infrared bands in burn severity assessment. We also found that infested and uninfested forests similarly experienced moderate to high degrees of burns where CBI (composite burn index) values were higher than 1. However, differences occurred in the regions with low burn severity (CBI values lower than 1), where uninfested stands revealed a much lower burn effect than that in infested stands, possibly due to their higher resilience to small fire disturbances as a result of higher leaf water content. |
| 3. | Chen, Gang; Metz, Margaret R; Rizzo, David M; Dillon, Whalen W; Meentemeyer, Ross K: Object-based assessment of burn severity in diseased forests using high-spatial and high-spectral resolution MASTER airborne imagery. In: ISPRS Journal of Photogrammetry and Remote Sensing, 102 , pp. 38-47, 2015. (Type: Journal Article | Abstract | Links | BibTeX) @article{Chen2015b, title = {Object-based assessment of burn severity in diseased forests using high-spatial and high-spectral resolution MASTER airborne imagery}, author = {Gang Chen and Margaret R. Metz and David M. Rizzo and Whalen W. Dillon and Ross K. Meentemeyer}, url = {http://www.sciencedirect.com/science/article/pii/S0924271615000210}, doi = {doi:10.1016/j.isprsjprs.2015.01.004}, year = {2015}, date = {2015-02-06}, journal = {ISPRS Journal of Photogrammetry and Remote Sensing}, volume = {102}, pages = {38-47}, abstract = {Forest ecosystems are subject to a variety of disturbances with increasing intensities and frequencies, which may permanently change the trajectories of forest recovery and disrupt the ecosystem services provided by trees. Fire and invasive species, especially exotic disease-causing pathogens and insects, are examples of disturbances that together could pose major threats to forest health. This study examines the impacts of fire and exotic disease (sudden oak death) on forests, with an emphasis on the assessment of post-fire burn severity in a forest where trees have experienced three stages of disease progression pre-fire: early-stage (trees retaining dried foliage and fine twigs), middle-stage (trees losing fine crown fuels), and late-stage (trees falling down). The research was conducted by applying Geographic Object-Based Image Analysis (GEOBIA) to MASTER airborne images that were acquired immediately following the fire for rapid assessment and contained both high-spatial (4 m) and high-spectral (50 bands) resolutions. Although GEOBIA has gradually become a standard tool for analyzing high-spatial resolution imagery, high-spectral resolution data (dozens to hundreds of bands) can dramatically reduce computation efficiency in the process of segmentation and object-based variable extraction, leading to complicated variable selection for succeeding modeling. Hence, we also assessed two widely used band reduction algorithms, PCA (principal component analysis) and MNF (minimum noise fraction), for the delineation of image objects and the subsequent performance of burn severity models using either PCA or MNF derived variables. To increase computation efficiency, only the top 5 PCA and MNF and top 10 PCA and MNF components were evaluated, which accounted for 10% and 20% of the total number of the original 50 spectral bands, respectively. Results show that if no band reduction was applied the models developed for the three stages of disease progression had relatively similar performance, where both spectral responses and texture contributed to burn assessments. However, the application of PCA and MNF introduced much greater variation among models across the three stages. For the early-stage disease progression, neither band reduction algorithms improved or retained the accuracy of burn severity modeling (except for the use of 10 MNF components). Compared to the no-band-reduction scenario, band reduction led to a greater level of overestimation of low-degree burns and underestimation of medium-degree burns, suggesting that the spectral variation removed by PCA and MNF was vital for distinguishing between the spectral reflectance from disease-induced dried crowns (still retaining high structural complexity) and fire ash. For the middle-stage, both algorithms improved the model R2 values by 2–37%, while the late-stage models had comparable or better performance to those using the original 50 spectral bands. This could be explained by the loss of tree crowns enabling better signal penetration, thus leading to reduced spectral variation from canopies. Hence, spectral bands containing a high degree of random noise were correctly removed by the band reduction algorithms. Compared to the middle-stage, the late-stage forest stands were covered by large piles of fallen trees and branches, resulting in higher variability of MASTER imagery. The ability of band reduction to improve the model performance for these late-stage forest stands was reduced, because the valuable spectral variation representing the actual late-stage forest status was partially removed by both algorithms as noise. Our results indicate that PCA and MNF are promising for balancing computation efficiency and the performance of burn severity models in forest stands subject to the middle and late stages of sudden oak death disease progression. Compared to PCA, MNF dramatically reduced image spectral variation, generating larger image objects with less complexity of object shapes. Whereas, PCA-based models delivered superior performance in most evaluated cases suggesting that some key spectral variability contributing to the accuracy of burn severity models in diseased forests may have been removed together with true spectral noise through MNF transformations.}, keywords = {}, pubstate = {published}, tppubtype = {article} } Forest ecosystems are subject to a variety of disturbances with increasing intensities and frequencies, which may permanently change the trajectories of forest recovery and disrupt the ecosystem services provided by trees. Fire and invasive species, especially exotic disease-causing pathogens and insects, are examples of disturbances that together could pose major threats to forest health. This study examines the impacts of fire and exotic disease (sudden oak death) on forests, with an emphasis on the assessment of post-fire burn severity in a forest where trees have experienced three stages of disease progression pre-fire: early-stage (trees retaining dried foliage and fine twigs), middle-stage (trees losing fine crown fuels), and late-stage (trees falling down). The research was conducted by applying Geographic Object-Based Image Analysis (GEOBIA) to MASTER airborne images that were acquired immediately following the fire for rapid assessment and contained both high-spatial (4 m) and high-spectral (50 bands) resolutions. Although GEOBIA has gradually become a standard tool for analyzing high-spatial resolution imagery, high-spectral resolution data (dozens to hundreds of bands) can dramatically reduce computation efficiency in the process of segmentation and object-based variable extraction, leading to complicated variable selection for succeeding modeling. Hence, we also assessed two widely used band reduction algorithms, PCA (principal component analysis) and MNF (minimum noise fraction), for the delineation of image objects and the subsequent performance of burn severity models using either PCA or MNF derived variables. To increase computation efficiency, only the top 5 PCA and MNF and top 10 PCA and MNF components were evaluated, which accounted for 10% and 20% of the total number of the original 50 spectral bands, respectively. Results show that if no band reduction was applied the models developed for the three stages of disease progression had relatively similar performance, where both spectral responses and texture contributed to burn assessments. However, the application of PCA and MNF introduced much greater variation among models across the three stages. For the early-stage disease progression, neither band reduction algorithms improved or retained the accuracy of burn severity modeling (except for the use of 10 MNF components). Compared to the no-band-reduction scenario, band reduction led to a greater level of overestimation of low-degree burns and underestimation of medium-degree burns, suggesting that the spectral variation removed by PCA and MNF was vital for distinguishing between the spectral reflectance from disease-induced dried crowns (still retaining high structural complexity) and fire ash. For the middle-stage, both algorithms improved the model R2 values by 2–37%, while the late-stage models had comparable or better performance to those using the original 50 spectral bands. This could be explained by the loss of tree crowns enabling better signal penetration, thus leading to reduced spectral variation from canopies. Hence, spectral bands containing a high degree of random noise were correctly removed by the band reduction algorithms. Compared to the middle-stage, the late-stage forest stands were covered by large piles of fallen trees and branches, resulting in higher variability of MASTER imagery. The ability of band reduction to improve the model performance for these late-stage forest stands was reduced, because the valuable spectral variation representing the actual late-stage forest status was partially removed by both algorithms as noise. Our results indicate that PCA and MNF are promising for balancing computation efficiency and the performance of burn severity models in forest stands subject to the middle and late stages of sudden oak death disease progression. Compared to PCA, MNF dramatically reduced image spectral variation, generating larger image objects with less complexity of object shapes. Whereas, PCA-based models delivered superior performance in most evaluated cases suggesting that some key spectral variability contributing to the accuracy of burn severity models in diseased forests may have been removed together with true spectral noise through MNF transformations. |
| 4. | Metz, Margaret R; Varner, Morgan J; Frangioso, Kerri M; Meentemeyer, Ross K; Rizzo, David M: Unexpected redwood mortality from synergies between wildfire and an emerging infectious disease . In: Ecology, 94 (10), pp. 2152-2159, 2013. (Type: Journal Article | Abstract | Links | BibTeX) @article{Metz2013, title = {Unexpected redwood mortality from synergies between wildfire and an emerging infectious disease }, author = {Margaret R. Metz and J. Morgan Varner and Kerri M. Frangioso and Ross K. Meentemeyer and David M. Rizzo}, url = {http://dx.doi.org/10.1890/13-0915.1}, doi = {10.1890/13-0915.1}, year = {2013}, date = {2013-10-01}, journal = {Ecology}, volume = {94}, number = {10}, pages = {2152-2159}, abstract = {An under-examined component of global change is the alteration of disturbance regimes due to warming climates, continued species invasions, and accelerated land-use change. These drivers of global change are themselves novel ecosystem disturbances that may interact with historically occurring disturbances in complex ways. Here we use the natural experiment presented by wildfires in redwood forests impacted by an emerging infectious disease to demonstrate unexpected synergies of novel disturbance interactions. The dominant tree, coast redwood (fire resistant without negative disease impacts), experienced unexpected synergistic increases in mortality when fire and disease co-occurred. The increased mortality risk, more than fourfold at the peak of the effect, was not predictable from impacts of either disturbance alone. Changes in fire behavior associated with changes to forest fuels that occurred through disease progression overwhelmed redwood's usual resilience to wildfire. Our results demonstrate the potential for interacting disturbances to initiate novel successional trajectories and compromise ecosystem resilience.}, keywords = {}, pubstate = {published}, tppubtype = {article} } An under-examined component of global change is the alteration of disturbance regimes due to warming climates, continued species invasions, and accelerated land-use change. These drivers of global change are themselves novel ecosystem disturbances that may interact with historically occurring disturbances in complex ways. Here we use the natural experiment presented by wildfires in redwood forests impacted by an emerging infectious disease to demonstrate unexpected synergies of novel disturbance interactions. The dominant tree, coast redwood (fire resistant without negative disease impacts), experienced unexpected synergistic increases in mortality when fire and disease co-occurred. The increased mortality risk, more than fourfold at the peak of the effect, was not predictable from impacts of either disturbance alone. Changes in fire behavior associated with changes to forest fuels that occurred through disease progression overwhelmed redwood's usual resilience to wildfire. Our results demonstrate the potential for interacting disturbances to initiate novel successional trajectories and compromise ecosystem resilience. |
